Gene annotation
Transcriptome id Sobic.003G376700.1
Synonym PGSIP1, GUX1, Sb03g041660
Functional annotation glycosyl transferase, putative, expressed
UniProt C5XRE4
Pfam PF01501
Panther DB PTHR11183 PTHR11183:SF62
NCBI CDD KOG1950; Glycosyl transferase, family 8 - glycogenin
KEGG Orthology -
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT3G18660 : plant glycogenin-like starch initiation protein 1
RAP-DB (Rice) LOC_Os01g65780.2 : glycosyl transferase, putative, expressed
MaizeGDB (Corn) Zm00025a043746 , Zm00025a039505 , Zm00025a026577
Brachypodium KQK10880
Barley HORVU3Hr1G091400.7 , HORVU3Hr1G091400.6 , HORVU3Hr1G091400.5 , HORVU0Hr1G000670.2 , HORVU3Hr1G091400.3 , HORVU3Hr1G091400.2 , HORVU3Hr1G091400.1 , HORVU3Hr1G091400.4 , HORVU1Hr1G065560.1 , HORVU1Hr1G065560.3 , HORVU1Hr1G065560.2 , HORVU1Hr1G065560.5 , HORVU1Hr1G065560.4 , HORVU1Hr1G065560.6 , HORVU0Hr1G000650.2 , HORVU0Hr1G000650.1
Wheat TraesCS3B02G442700 , TraesCS3B02G442700 , TraesCS3B02G442700 , TraesCS3D02G404100 , TraesCS1B02G277500 , TraesCS1D02G266700 , TraesCS1D02G266700 , TraesCS3D02G404100 , TraesCS3A02G409200 , TraesCS3A02G409200 , TraesCS1A02G266600 , TraesCS1A02G266600
Populus PNT35176 , PNT35177 , PNT35174 , PNT35175 , PNT37431 , PNT37430 , PNT37432


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cDNA sequences
Sobic.003G376700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G441600 potyvirus VPg interacting protein, putative, expressed -
2 Sobic.006G218700 tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.009G134600 gibberellin receptor GID1L2, putative, expressed K14493: gibberellin receptor GID1
4 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
5 Sobic.009G152200 OsFBT7 - F-box and tubby domain containing protein, expressed -
6 Sobic.001G420700 clathrin assembly protein, putative, expressed -
7 Sobic.001G076000 PHLOEM 2-LIKE A10, putative, expressed -
8 Sobic.003G052400 proline-rich family protein, putative, expressed -
9 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
10 Sobic.008G188700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
11 Sobic.009G230700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
12 Sobic.008G161000 protein kinase domain containing protein, expressed -
13 Sobic.001G341100 mps one binder kinase activator-like 1A, putative, expressed K06685: MOB1, MOB kinase activator 1
14 Sobic.003G119800 Expressed in older stem(PubMedID : 28649278)@no apical meristem protein, putative, expressed -
15 Sobic.003G056500 staphylococcal nuclease homologue, putative, expressed -
16 Sobic.009G195900 OsFBT9 - F-box and tubby domain containing protein, expressed -
17 Sobic.007G178200 ER lumen protein retaining receptor, putative, expressed -
18 Sobic.006G208800 YT521-B, putative, expressed -
19 Sobic.007G011000 synaptobrevin-related family protein, putative, expressed -
20 Sobic.007G026100 Divergent PAP2 family domain containing protein, expressed K09775: uncharacterized protein


Gene co-expression network
sample Sobic003G376700 Sobic003G376700 Sobic001G441600 Sobic001G441600 Sobic003G376700--Sobic001G441600 Sobic006G218700 Sobic006G218700 Sobic003G376700--Sobic006G218700 Sobic009G134600 Sobic009G134600 Sobic003G376700--Sobic009G134600 Sobic002G330300 Sobic002G330300 Sobic003G376700--Sobic002G330300 Sobic009G152200 Sobic009G152200 Sobic003G376700--Sobic009G152200 Sobic001G420700 Sobic001G420700 Sobic003G376700--Sobic001G420700 Sobic001G076000 Sobic001G076000 Sobic003G376700--Sobic001G076000 Sobic003G052400 Sobic003G052400 Sobic003G376700--Sobic003G052400 Sobic008G016900 Sobic008G016900 Sobic003G376700--Sobic008G016900 Sobic003G116700 Sobic003G116700 Sobic001G441600--Sobic003G116700 Sobic008G161000 Sobic008G161000 Sobic001G441600--Sobic008G161000 Sobic001G335400 Sobic001G335400 Sobic001G441600--Sobic001G335400 Sobic009G016201 Sobic009G016201 Sobic001G441600--Sobic009G016201 Sobic003G396000 Sobic003G396000 Sobic001G441600--Sobic003G396000 Sobic001G441600--Sobic009G152200 Sobic003G115800 Sobic003G115800 Sobic001G441600--Sobic003G115800 Sobic010G071200 Sobic010G071200 Sobic001G441600--Sobic010G071200 Sobic003G317200 Sobic003G317200 Sobic001G441600--Sobic003G317200 Sobic006G218700--Sobic009G134600 Sobic006G218700--Sobic003G396000 Sobic003G044200 Sobic003G044200 Sobic006G218700--Sobic003G044200 Sobic003G119800 Sobic003G119800 Sobic006G218700--Sobic003G119800 Sobic003G379700 Sobic003G379700 Sobic006G218700--Sobic003G379700 Sobic006G218700--Sobic001G076000 Sobic009G167600 Sobic009G167600 Sobic006G218700--Sobic009G167600 Sobic003G056500 Sobic003G056500 Sobic006G218700--Sobic003G056500 Sobic006G218700--Sobic003G376700 Sobic009G134600--Sobic003G119800 Sobic009G134600--Sobic006G218700 Sobic009G230700 Sobic009G230700 Sobic009G134600--Sobic009G230700 Sobic007G178200 Sobic007G178200 Sobic009G134600--Sobic007G178200 Sobic009G059700 Sobic009G059700 Sobic009G134600--Sobic009G059700 Sobic009G134600--Sobic003G056500 Sobic009G134600--Sobic002G330300 Sobic001G290200 Sobic001G290200 Sobic009G134600--Sobic001G290200 Sobic004G031600 Sobic004G031600 Sobic009G134600--Sobic004G031600 Sobic002G330300--Sobic008G016900 Sobic002G379400 Sobic002G379400 Sobic002G330300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G330300--Sobic010G052800 Sobic010G228000 Sobic010G228000 Sobic002G330300--Sobic010G228000 Sobic007G011000 Sobic007G011000 Sobic002G330300--Sobic007G011000 Sobic004G025000 Sobic004G025000 Sobic002G330300--Sobic004G025000 Sobic002G118600 Sobic002G118600 Sobic002G330300--Sobic002G118600 Sobic006G263100 Sobic006G263100 Sobic002G330300--Sobic006G263100 Sobic007G188100 Sobic007G188100 Sobic002G330300--Sobic007G188100 Sobic009G152200--Sobic008G161000 Sobic007G186300 Sobic007G186300 Sobic009G152200--Sobic007G186300 Sobic007G059900 Sobic007G059900 Sobic009G152200--Sobic007G059900 Sobic001G403700 Sobic001G403700 Sobic009G152200--Sobic001G403700 Sobic001G330700 Sobic001G330700 Sobic009G152200--Sobic001G330700 Sobic009G152200--Sobic009G016201 Sobic009G152200--Sobic003G115800 Sobic003G248600 Sobic003G248600 Sobic009G152200--Sobic003G248600 Sobic003G249800 Sobic003G249800 Sobic009G152200--Sobic003G249800 Sobic005G046100 Sobic005G046100 Sobic001G420700--Sobic005G046100 Sobic008G188700 Sobic008G188700 Sobic001G420700--Sobic008G188700 Sobic007G136700 Sobic007G136700 Sobic001G420700--Sobic007G136700 Sobic001G420700--Sobic001G441600 Sobic001G420700--Sobic003G116700 Sobic004G150400 Sobic004G150400 Sobic001G420700--Sobic004G150400 Sobic003G424400 Sobic003G424400 Sobic001G420700--Sobic003G424400 Sobic001G420700--Sobic003G317200 Sobic001G069800 Sobic001G069800 Sobic001G420700--Sobic001G069800 Sobic001G149700 Sobic001G149700 Sobic001G076000--Sobic001G149700 Sobic001G478300 Sobic001G478300 Sobic001G076000--Sobic001G478300 Sobic008G142700 Sobic008G142700 Sobic001G076000--Sobic008G142700 Sobic001G076000--Sobic003G379700 Sobic001G427800 Sobic001G427800 Sobic001G076000--Sobic001G427800 Sobic001G076000--Sobic001G441600 Sobic001G076000--Sobic010G071200 Sobic006G257900 Sobic006G257900 Sobic001G076000--Sobic006G257900 Sobic001G076000--Sobic003G116700 Sobic010G017000 Sobic010G017000 Sobic003G052400--Sobic010G017000 Sobic001G408100 Sobic001G408100 Sobic003G052400--Sobic001G408100 Sobic002G348600 Sobic002G348600 Sobic003G052400--Sobic002G348600 Sobic001G067900 Sobic001G067900 Sobic003G052400--Sobic001G067900 Sobic008G003600 Sobic008G003600 Sobic003G052400--Sobic008G003600 Sobic003G217100 Sobic003G217100 Sobic003G052400--Sobic003G217100 Sobic009G160200 Sobic009G160200 Sobic003G052400--Sobic009G160200 Sobic006G257001 Sobic006G257001 Sobic003G052400--Sobic006G257001 Sobic001G237500 Sobic001G237500 Sobic003G052400--Sobic001G237500 Sobic008G016900--Sobic002G330300 Sobic008G016900--Sobic002G379400 Sobic010G062800 Sobic010G062800 Sobic008G016900--Sobic010G062800 Sobic001G283500 Sobic001G283500 Sobic008G016900--Sobic001G283500 Sobic008G016900--Sobic007G188100 Sobic004G145200 Sobic004G145200 Sobic008G016900--Sobic004G145200 Sobic001G162100 Sobic001G162100 Sobic008G016900--Sobic001G162100 Sobic008G016900--Sobic009G059700 Sobic002G343500 Sobic002G343500 Sobic008G016900--Sobic002G343500
Octagon: transcription factors


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