Gene annotation
Transcriptome id Sobic.006G148200.2,Sobic.006G148200.3,Sobic.006G148200.1
Synonym Sb06g022680, PGSIP6
Functional annotation glycosyl transferase 8 domain containing protein, putative, expressed
UniProt A0A1Z5RDZ9 , A0A1Z5REP5 , C5YCD0
Pfam PF01501
Panther DB PTHR11183 PTHR11183:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT5G18480 : plant glycogenin-like starch initiation protein 6
RAP-DB (Rice) LOC_Os02g41520.1 : glycosyl transferase 8 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a056517
Brachypodium PNT69096 , KQJ83610 , KQJ83611
Barley HORVU2Hr1G089320.8 , HORVU2Hr1G089320.9 , HORVU2Hr1G089320.6 , HORVU2Hr1G089320.7 , HORVU2Hr1G089320.4 , HORVU2Hr1G089320.5 , HORVU2Hr1G089320.2 , HORVU2Hr1G089320.3 , HORVU2Hr1G089320.1 , HORVU2Hr1G089320.10
Wheat TraesCS2A02G381700 , TraesCS2D02G378200 , TraesCS6D02G211500 , TraesCS2B02G399000
Populus -


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cDNA sequences
Sobic.006G148200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G274400 GCN5-related N-acetyltransferase, putative, expressed -
2 Sobic.001G085100 expressed protein -
3 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
4 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
5 Sobic.009G228700 expressed protein -
6 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
7 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
8 Sobic.010G000900 spotted leaf 11, putative, expressed -
9 Sobic.001G048700 TBC domain containing protein, expressed -
10 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
11 Sobic.003G007500 CK1_CaseinKinase_1.1 - CK1 includes the casein kinase 1 kinases, expressed -
12 Sobic.003G312200 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
13 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7
14 Sobic.006G232000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
15 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
16 Sobic.006G194500 expressed protein -
17 Sobic.006G249700 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
18 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
19 Sobic.010G261600 ubiquitin interaction motif family protein, expressed -
20 Sobic.001G047400 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4


Gene co-expression network
sample Sobic006G148200 Sobic006G148200 Sobic004G274400 Sobic004G274400 Sobic006G148200--Sobic004G274400 Sobic001G085100 Sobic001G085100 Sobic006G148200--Sobic001G085100 Sobic006G034000 Sobic006G034000 Sobic006G148200--Sobic006G034000 Sobic001G323000 Sobic001G323000 Sobic006G148200--Sobic001G323000 Sobic009G228700 Sobic009G228700 Sobic006G148200--Sobic009G228700 Sobic001G033500 Sobic001G033500 Sobic006G148200--Sobic001G033500 Sobic001G206900 Sobic001G206900 Sobic006G148200--Sobic001G206900 Sobic010G000900 Sobic010G000900 Sobic006G148200--Sobic010G000900 Sobic001G048700 Sobic001G048700 Sobic006G148200--Sobic001G048700 Sobic004G274400--Sobic006G148200 Sobic004G274400--Sobic001G323000 Sobic006G225600 Sobic006G225600 Sobic004G274400--Sobic006G225600 Sobic003G002400 Sobic003G002400 Sobic004G274400--Sobic003G002400 Sobic009G219000 Sobic009G219000 Sobic004G274400--Sobic009G219000 Sobic002G131900 Sobic002G131900 Sobic004G274400--Sobic002G131900 Sobic003G312200 Sobic003G312200 Sobic004G274400--Sobic003G312200 Sobic004G274400--Sobic001G206900 Sobic003G007500 Sobic003G007500 Sobic004G274400--Sobic003G007500 Sobic006G101700 Sobic006G101700 Sobic001G085100--Sobic006G101700 Sobic001G261436 Sobic001G261436 Sobic001G085100--Sobic001G261436 Sobic001G085100--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G085100--Sobic007G167900 Sobic001G085100--Sobic001G206900 Sobic001G047400 Sobic001G047400 Sobic001G085100--Sobic001G047400 Sobic004G066200 Sobic004G066200 Sobic001G085100--Sobic004G066200 Sobic001G091300 Sobic001G091300 Sobic001G085100--Sobic001G091300 Sobic003G012200 Sobic003G012200 Sobic001G085100--Sobic003G012200 Sobic006G034000--Sobic003G312200 Sobic006G034000--Sobic001G323000 Sobic003G436300 Sobic003G436300 Sobic006G034000--Sobic003G436300 Sobic006G034000--Sobic006G148200 Sobic001G180900 Sobic001G180900 Sobic006G034000--Sobic001G180900 Sobic010G130000 Sobic010G130000 Sobic006G034000--Sobic010G130000 Sobic006G034000--Sobic001G091300 Sobic008G110600 Sobic008G110600 Sobic006G034000--Sobic008G110600 Sobic006G034000--Sobic009G228700 Sobic001G323000--Sobic001G206900 Sobic001G323000--Sobic006G034000 Sobic001G323000--Sobic009G228700 Sobic001G057800 Sobic001G057800 Sobic001G323000--Sobic001G057800 Sobic001G323000--Sobic003G312200 Sobic001G323000--Sobic006G148200 Sobic009G207000 Sobic009G207000 Sobic001G323000--Sobic009G207000 Sobic001G323000--Sobic010G000900 Sobic001G323000--Sobic001G085100 Sobic009G228700--Sobic004G066200 Sobic009G228700--Sobic009G207000 Sobic009G228700--Sobic001G091300 Sobic009G228700--Sobic001G323000 Sobic001G356600 Sobic001G356600 Sobic009G228700--Sobic001G356600 Sobic006G249700 Sobic006G249700 Sobic009G228700--Sobic006G249700 Sobic009G228700--Sobic006G148200 Sobic009G228700--Sobic003G312200 Sobic001G124200 Sobic001G124200 Sobic009G228700--Sobic001G124200 Sobic001G283200 Sobic001G283200 Sobic001G033500--Sobic001G283200 Sobic007G184500 Sobic007G184500 Sobic001G033500--Sobic007G184500 Sobic001G033500--Sobic006G148200 Sobic007G118000 Sobic007G118000 Sobic001G033500--Sobic007G118000 Sobic001G033500--Sobic001G085100 Sobic010G073100 Sobic010G073100 Sobic001G033500--Sobic010G073100 Sobic001G458700 Sobic001G458700 Sobic001G033500--Sobic001G458700 Sobic002G113800 Sobic002G113800 Sobic001G033500--Sobic002G113800 Sobic001G033500--Sobic003G012200 Sobic001G206900--Sobic001G323000 Sobic001G206900--Sobic003G312200 Sobic004G010900 Sobic004G010900 Sobic001G206900--Sobic004G010900 Sobic004G181900 Sobic004G181900 Sobic001G206900--Sobic004G181900 Sobic001G206900--Sobic001G085100 Sobic009G149500 Sobic009G149500 Sobic001G206900--Sobic009G149500 Sobic001G206900--Sobic006G148200 Sobic001G206900--Sobic007G167900 Sobic003G349300 Sobic003G349300 Sobic001G206900--Sobic003G349300 Sobic002G400000 Sobic002G400000 Sobic010G000900--Sobic002G400000 Sobic010G000900--Sobic003G012200 Sobic010G000900--Sobic001G047400 Sobic003G261400 Sobic003G261400 Sobic010G000900--Sobic003G261400 Sobic004G130900 Sobic004G130900 Sobic010G000900--Sobic004G130900 Sobic001G051200 Sobic001G051200 Sobic010G000900--Sobic001G051200 Sobic010G000900--Sobic001G323000 Sobic001G388200 Sobic001G388200 Sobic010G000900--Sobic001G388200 Sobic010G000900--Sobic001G085100 Sobic001G048700--Sobic003G007500 Sobic001G048700--Sobic006G148200 Sobic002G296300 Sobic002G296300 Sobic001G048700--Sobic002G296300 Sobic002G376300 Sobic002G376300 Sobic001G048700--Sobic002G376300 Sobic001G048700--Sobic009G228700 Sobic009G238800 Sobic009G238800 Sobic001G048700--Sobic009G238800 Sobic004G072800 Sobic004G072800 Sobic001G048700--Sobic004G072800 Sobic001G048700--Sobic001G323000 Sobic001G048700--Sobic007G118000
Octagon: transcription factors


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