Sb01g006510


Gene annotaion
Orghologs
FL-cDNA clone
RNA-seq
Find similar expressed genes
Gene co-expression network

Gene annotation
Gene models Sb01g006510.1
Synonym
Functional annotation
UniProt C5WZ47
InterPro IPR022059: Protein of unknown function DUF3615
Pfam PF12274: Protein of unknown function (DUF3615)
Panther DB
NCBI CDD
KEGG Orthology
EC number
Ontology


Orthologs
TAIR
RAP-DB (Rice) OS03G0295300: Protein of unknown function DUF3615 domain containing protein. (Os03t0295300-01)
MaizeGDB (Corn)
Brachypodium
Barley
Wheat
Populus


Full-length cDNA clone information
fl-cDNA clone ID and sequence 074_L10.ab1
Gene structure


Expression pattern by RNA-Seq analysis
FPKM plot
Expression pattern on the genome browser


Find similar expressed genes
Top 20 genes with similar expressed profiles
Link to sample list (same order with the figure)

Rank Gene Score (JSD) Function KEGG pathway
1 Sb01g006510 0.00000 -
2 Sb01g015660 0.10426 ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2); binding / soluble NSF attachment protein -
3 Sb07g025240 0.10564 MVA1; acetyl-CoA C-acetyltransferase/ hydroxymethylglutaryl-CoA synthase Synthesis and degradation of ketone bodies Valine, leucine and isoleucine degradation Butanoate metabolism Terpenoid backbone biosynthesis Metabolic pathways Biosynthesis of secondary metabolites
4 Sb03g008990 0.10676 unknown protein -
5 Sb03g031270 0.10720 -
6 Sb08g017030 0.10810 -
7 Sb01g012310 0.10815 ubiquitin thiolesterase -
8 Sb07g002770 0.11209 TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2); tryptophan synthase Glycine, serine and threonine metabolism Phenylalanine, tyrosine and tryptophan biosynthesis Metabolic pathways Biosynthesis of secondary metabolites Biosynthesis of amino acids
9 Sb03g043876 0.11213 RUS1 (ROOT UVB SENSITIVE 1) -
10 Sb04g009140 0.11263 dual specificity protein phosphatase-related -
11 Sb09g030300 0.11289 DNA binding -
12 Sb09g022000 0.11329 unknown protein -
13 Sb02g042030 0.11370 NOP56 (Arabidopsis homolog of nucleolar protein Nop56) Ribosome biogenesis in eukaryotes
14 Sb03g003560 0.11556 -
15 Sb01g008320 0.11759 pentatricopeptide (PPR) repeat-containing protein -
16 Sb03g034230 0.11774 HXK1 (HEXOKINASE 1); ATP binding / fructokinase/ glucokinase/ hexokinase Glycolysis / Gluconeogenesis Fructose and mannose metabolism Galactose metabolism Starch and sucrose metabolism Amino sugar and nucleotide sugar metabolism Metabolic pathways Biosynthesis of secondary metabolites Carbon metabolism
17 Sb06g032300 0.11881 -
18 Sb08g016580 0.11889 P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter -
19 Sb01g007840 0.12106 ATSPO11-1; ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)/ catalytic -
20 Sb06g019640 0.12162 unknown protein -


Gene co-expression network
Gene co-expression network
sample Sb01g006510 Sb01g006510 Sb01g015660 Sb01g015660 Sb01g006510--Sb01g015660 Sb07g025240 Sb07g025240 Sb01g006510--Sb07g025240 Sb03g008990 Sb03g008990 Sb01g006510--Sb03g008990 Sb03g031270 Sb03g031270 Sb01g006510--Sb03g031270 Sb08g017030 Sb08g017030 Sb01g006510--Sb08g017030 Sb01g012310 Sb01g012310 Sb01g006510--Sb01g012310 Sb02g041260 Sb02g041260 Sb01g015660--Sb02g041260 Sb07g028510 Sb07g028510 Sb01g015660--Sb07g028510 Sb10g023300 Sb10g023300 Sb01g015660--Sb10g023300 Sb09g024600 Sb09g024600 Sb01g015660--Sb09g024600 Sb07g028830 Sb07g028830 Sb01g015660--Sb07g028830 Sb01g004630 Sb01g004630 Sb01g015660--Sb01g004630 Sb07g025240--Sb08g017030 Sb07g025240--Sb01g012310 Sb09g022000 Sb09g022000 Sb07g025240--Sb09g022000 Sb06g032300 Sb06g032300 Sb07g025240--Sb06g032300 Sb09g004030 Sb09g004030 Sb07g025240--Sb09g004030 Sb03g046010 Sb03g046010 Sb07g025240--Sb03g046010 Sb01g038710 Sb01g038710 Sb03g008990--Sb01g038710 Sb09g020630 Sb09g020630 Sb03g008990--Sb09g020630 Sb02g035770 Sb02g035770 Sb03g008990--Sb02g035770 Sb08g021310 Sb08g021310 Sb03g008990--Sb08g021310 Sb04g035010 Sb04g035010 Sb03g008990--Sb04g035010 Sb03g032470 Sb03g032470 Sb03g008990--Sb03g032470 Sb03g031270--Sb07g028510 Sb02g042030 Sb02g042030 Sb03g031270--Sb02g042030 Sb07g006130 Sb07g006130 Sb03g031270--Sb07g006130 Sb02g042610 Sb02g042610 Sb03g031270--Sb02g042610 Sb01g008500 Sb01g008500 Sb03g031270--Sb01g008500 Sb02g004580 Sb02g004580 Sb03g031270--Sb02g004580 Sb08g017030--Sb01g012310 Sb05g000850 Sb05g000850 Sb08g017030--Sb05g000850 Sb01g007840 Sb01g007840 Sb08g017030--Sb01g007840 Sb03g041730 Sb03g041730 Sb08g017030--Sb03g041730 Sb03g026470 Sb03g026470 Sb08g017030--Sb03g026470 Sb03g040680 Sb03g040680 Sb08g017030--Sb03g040680 Sb01g012310--Sb05g000850 Sb03g003560 Sb03g003560 Sb01g012310--Sb03g003560 Sb08g021060 Sb08g021060 Sb01g012310--Sb08g021060 Sb06g032380 Sb06g032380 Sb01g012310--Sb06g032380 Sb01g008320 Sb01g008320 Sb01g012310--Sb01g008320 Sb02g034650 Sb02g034650 Sb01g012310--Sb02g034650
Octagon: transcription factors