Sb02g000360


Gene annotaion
Orghologs
FL-cDNA clone
RNA-seq
Find similar expressed genes
Gene co-expression network

Gene annotation
Gene models Sb02g000360.1
Synonym
Functional annotation unknown protein
UniProt C5X732
InterPro
Pfam
Panther DB
NCBI CDD
KEGG Orthology
EC number
Ontology GO:0003674: Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions. [GOC:go_curators]
GO:0008150: Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end. [GOC:go_curators, GOC:isa_complete]


Orthologs
TAIR AT1G50660: unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins in 1325 species: Archae - 461; Bacteria - 2309; Metazoa - 11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other Eukaryotes - 4809 (source: NCBI BLink).
RAP-DB (Rice) OS07G0102200: Conserved hypothetical protein. (Os07t0102200-01)
MaizeGDB (Corn) GRMZM2G090744
Brachypodium
Barley Traes_2BL_804CDC16F Traes_2AL_31D45C987
Wheat
Populus MLOC_38460


Full-length cDNA clone information
fl-cDNA clone ID and sequence 102_F09.ab1 107_A07.ab1
Gene structure


Expression pattern by RNA-Seq analysis
FPKM plot
Expression pattern on the genome browser


Find similar expressed genes
Top 20 genes with similar expressed profiles
Link to sample list (same order with the figure)

Rank Gene Score (JSD) Function KEGG pathway
1 Sb02g000360 0.00000 unknown protein -
2 Sb07g000570 0.09634 glucose-6-phosphate/phosphate translocator-related -
3 Sb06g000250 0.09894 Fh5 (FORMIN HOMOLOGY5); actin binding -
4 Sb10g012750 0.10271 -
5 Sb05g003230 0.10995 dual specificity protein phosphatase family protein -
6 Sb09g004030 0.11019 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein -
7 Sb01g014780 0.11046 unknown protein -
8 Sb01g036540 0.11108 unknown protein -
9 Sb02g033515 0.11128 lipid transporter -
10 Sb03g034230 0.11212 HXK1 (HEXOKINASE 1); ATP binding / fructokinase/ glucokinase/ hexokinase Glycolysis / Gluconeogenesis Fructose and mannose metabolism Galactose metabolism Starch and sucrose metabolism Amino sugar and nucleotide sugar metabolism Metabolic pathways Biosynthesis of secondary metabolites Carbon metabolism
11 Sb03g046475 0.11316 catalytic/ protein binding / serine-type endopeptidase/ serine-type peptidase -
12 Sb09g023860 0.11398 oxidoreductase, 2OG-Fe(II) oxygenase family protein Arginine and proline metabolism Metabolic pathways
13 Sb03g046010 0.11469 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein -
14 Sb02g028470 0.11481 unknown protein -
15 Sb07g027970 0.11590 unknown protein -
16 Sb02g033780 0.11595 protein binding / zinc ion binding -
17 Sb01g036120 0.11636 AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52); DNA binding / transcription factor -
18 Sb06g023910 0.11661 unknown protein -
19 Sb07g004030 0.11725 myb family transcription factor -
20 Sb06g019820 0.11763 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein -


Gene co-expression network
Gene co-expression network
sample Sb02g000360 Sb02g000360 Sb07g000570 Sb07g000570 Sb02g000360--Sb07g000570 Sb06g000250 Sb06g000250 Sb02g000360--Sb06g000250 Sb10g012750 Sb10g012750 Sb02g000360--Sb10g012750 Sb05g003230 Sb05g003230 Sb02g000360--Sb05g003230 Sb09g004030 Sb09g004030 Sb02g000360--Sb09g004030 Sb01g014780 Sb01g014780 Sb02g000360--Sb01g014780 Sb02g033515 Sb02g033515 Sb07g000570--Sb02g033515 Sb07g027970 Sb07g027970 Sb07g000570--Sb07g027970 Sb02g030010 Sb02g030010 Sb07g000570--Sb02g030010 Sb01g036430 Sb01g036430 Sb07g000570--Sb01g036430 Sb07g000420 Sb07g000420 Sb07g000570--Sb07g000420 Sb02g028470 Sb02g028470 Sb07g000570--Sb02g028470 Sb01g045978 Sb01g045978 Sb06g000250--Sb01g045978 Sb06g029335 Sb06g029335 Sb06g000250--Sb06g029335 Sb02g024570 Sb02g024570 Sb06g000250--Sb02g024570 Sb06g032300 Sb06g032300 Sb06g000250--Sb06g032300 Sb10g030730 Sb10g030730 Sb06g000250--Sb10g030730 Sb10g030870 Sb10g030870 Sb06g000250--Sb10g030870 Sb10g012750--Sb09g004030 Sb03g046475 Sb03g046475 Sb10g012750--Sb03g046475 Sb03g034230 Sb03g034230 Sb10g012750--Sb03g034230 Sb01g041940 Sb01g041940 Sb10g012750--Sb01g041940 Sb04g009700 Sb04g009700 Sb10g012750--Sb04g009700 Sb08g004650 Sb08g004650 Sb10g012750--Sb08g004650 Sb05g003230--Sb07g027970 Sb01g035000 Sb01g035000 Sb05g003230--Sb01g035000 Sb08g004710 Sb08g004710 Sb05g003230--Sb08g004710 Sb04g009260 Sb04g009260 Sb05g003230--Sb04g009260 Sb07g003330 Sb07g003330 Sb05g003230--Sb07g003330 Sb01g036540 Sb01g036540 Sb05g003230--Sb01g036540 Sb03g009930 Sb03g009930 Sb09g004030--Sb03g009930 Sb09g018450 Sb09g018450 Sb09g004030--Sb09g018450 Sb08g020180 Sb08g020180 Sb09g004030--Sb08g020180 Sb01g045974 Sb01g045974 Sb09g004030--Sb01g045974 Sb03g029250 Sb03g029250 Sb09g004030--Sb03g029250 Sb07g004030 Sb07g004030 Sb09g004030--Sb07g004030 Sb01g014780--Sb02g028470 Sb01g014780--Sb04g009700 Sb06g023910 Sb06g023910 Sb01g014780--Sb06g023910 Sb01g042640 Sb01g042640 Sb01g014780--Sb01g042640 Sb02g032950 Sb02g032950 Sb01g014780--Sb02g032950
Octagon: transcription factors