Sb03g037590


Gene annotaion
Orghologs
FL-cDNA clone
RNA-seq
Find similar expressed genes
Gene co-expression network

Gene annotation
Gene models Sb03g037590.1
Synonym
Functional annotation FAD-dependent oxidoreductase family protein
UniProt C5XN37
InterPro IPR006076: FAD dependent oxidoreductase
Pfam PF01266: FAD dependent oxidoreductase
Panther DB PTHR13847
NCBI CDD KOG2665: Predicted FAD-dependent oxidoreductase
KEGG Orthology
EC number
Ontology GO:0003674: Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions. [GOC:go_curators]
GO:0008150: Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end. [GOC:go_curators, GOC:isa_complete]
GO:0016491: Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. [GOC:go_curators]
GO:0055114: A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. [GOC:dhl, GOC:ecd, GOC:jh2, GOC:jid, GOC:mlg, GOC:rph]


Orthologs
TAIR AT3G56840: FAD-dependent oxidoreductase family protein
RAP-DB (Rice) OS01G0809900: FAD dependent oxidoreductase domain containing protein. (Os01t0809900-01)
MaizeGDB (Corn) GRMZM2G462239 GRMZM2G079100 GRMZM2G035709
Brachypodium BRADI2G52900
Barley Traes_3DL_BCD62C880 Traes_3B_91AED5BAA Traes_3AL_CB77934F1
Wheat Potri.006G026100
Populus MLOC_68770


Full-length cDNA clone information
fl-cDNA clone ID and sequence 048_P09.ab1 063_O24.ab1
Gene structure


Expression pattern by RNA-Seq analysis
FPKM plot
Expression pattern on the genome browser


Find similar expressed genes
Top 20 genes with similar expressed profiles
Link to sample list (same order with the figure)

Rank Gene Score (JSD) Function KEGG pathway
1 Sb03g037590 0.00000 FAD-dependent oxidoreductase family protein -
2 Sb08g017030 0.06923 -
3 Sb04g024530 0.07391 -
4 Sb08g021310 0.07469 -
5 Sb01g008500 0.07674 magnesium transporter CorA-like family protein (MRS2-2) -
6 Sb09g025130 0.07753 unknown protein -
7 Sb03g026470 0.07788 DNA-binding protein, putative -
8 Sb03g013060 0.07800 ATABC1 (ARABIDOPSIS THALIANA ABC TRANSPORTER 1); transporter -
9 Sb07g007530 0.08030 aldose 1-epimerase family protein Glycolysis / Gluconeogenesis Metabolic pathways Biosynthesis of secondary metabolites
10 Sb07g002770 0.08074 TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2); tryptophan synthase Glycine, serine and threonine metabolism Phenylalanine, tyrosine and tryptophan biosynthesis Metabolic pathways Biosynthesis of secondary metabolites Biosynthesis of amino acids
11 Sb02g039500 0.08130 catalytic -
12 Sb04g035110 0.08184 VIP2 (VIRE2 INTERACTING PROTEIN2); protein binding / transcription regulator RNA degradation
13 Sb03g040680 0.08314 ATP binding -
14 Sb02g033310 0.08360 zinc ion binding -
15 Sb01g011840 0.08367 ZML1 (ZIM-LIKE 1); transcription factor -
16 Sb02g025680 0.08574 emb1187 (embryo defective 1187); kinase/ phosphotransferase, alcohol group as acceptor Glycerophospholipid metabolism Metabolic pathways
17 Sb04g011290 0.08610 phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein -
18 Sb09g020630 0.08645 glycine-rich protein -
19 Sb05g013190 0.08668 ZFN1 (ZINC FINGER PROTEIN 1); DNA binding / nuclease/ nucleic acid binding -
20 Sb01g010136 0.08683 unknown protein -


Gene co-expression network
Gene co-expression network
sample Sb03g037590 Sb03g037590 Sb08g017030 Sb08g017030 Sb03g037590--Sb08g017030 Sb04g024530 Sb04g024530 Sb03g037590--Sb04g024530 Sb08g021310 Sb08g021310 Sb03g037590--Sb08g021310 Sb01g008500 Sb01g008500 Sb03g037590--Sb01g008500 Sb09g025130 Sb09g025130 Sb03g037590--Sb09g025130 Sb03g026470 Sb03g026470 Sb03g037590--Sb03g026470 Sb08g017030--Sb03g026470 Sb05g000850 Sb05g000850 Sb08g017030--Sb05g000850 Sb01g007840 Sb01g007840 Sb08g017030--Sb01g007840 Sb03g041730 Sb03g041730 Sb08g017030--Sb03g041730 Sb01g012310 Sb01g012310 Sb08g017030--Sb01g012310 Sb03g040680 Sb03g040680 Sb08g017030--Sb03g040680 Sb04g024530--Sb03g040680 Sb02g002120 Sb02g002120 Sb04g024530--Sb02g002120 Sb07g007530 Sb07g007530 Sb04g024530--Sb07g007530 Sb04g028140 Sb04g028140 Sb04g024530--Sb04g028140 Sb02g006600 Sb02g006600 Sb04g024530--Sb02g006600 Sb01g030230 Sb01g030230 Sb04g024530--Sb01g030230 Sb03g041090 Sb03g041090 Sb08g021310--Sb03g041090 Sb10g025720 Sb10g025720 Sb08g021310--Sb10g025720 Sb06g016020 Sb06g016020 Sb08g021310--Sb06g016020 Sb03g039690 Sb03g039690 Sb08g021310--Sb03g039690 Sb09g000470 Sb09g000470 Sb08g021310--Sb09g000470 Sb04g000650 Sb04g000650 Sb08g021310--Sb04g000650 Sb01g008500--Sb03g026470 Sb02g041660 Sb02g041660 Sb01g008500--Sb02g041660 Sb02g042610 Sb02g042610 Sb01g008500--Sb02g042610 Sb02g039500 Sb02g039500 Sb01g008500--Sb02g039500 Sb10g023890 Sb10g023890 Sb01g008500--Sb10g023890 Sb06g002790 Sb06g002790 Sb01g008500--Sb06g002790 Sb09g025130--Sb07g007530 Sb01g022170 Sb01g022170 Sb09g025130--Sb01g022170 Sb01g026860 Sb01g026860 Sb09g025130--Sb01g026860 Sb07g005050 Sb07g005050 Sb09g025130--Sb07g005050 Sb04g035110 Sb04g035110 Sb09g025130--Sb04g035110 Sb09g028100 Sb09g028100 Sb09g025130--Sb09g028100 Sb03g026470--Sb07g007530 Sb03g026470--Sb02g039500 Sb01g045430 Sb01g045430 Sb03g026470--Sb01g045430 Sb03g013060 Sb03g013060 Sb03g026470--Sb03g013060 Sb03g035130 Sb03g035130 Sb03g026470--Sb03g035130 Sb0011s005460 Sb0011s005460 Sb03g026470--Sb0011s005460
Octagon: transcription factors